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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27714738_27714844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27714738 - 27714844

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTATCCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATCC

Flanking Amino Acid:

ATTSASLSVEIPEVVSPELE

Intron Amino Acid Position:

3107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

81.1

26.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.2

0.68

0.7

78.2

30.3

Minor 5ss

-1

2.9

52.8

38.5

Minor BPS

76.7

0.82

1.5

85.84

32.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580