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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27717937_27718029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27717937 - 27718029

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

ATCTTGCTAACT

Flanking Amino Acid:

IGANARLHVETVKIIKKPKD

Intron Amino Acid Position:

2571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

74.2

0.6

0.9

75.7

Major PPT

79.2

0.66

0.9

83.9

24.8

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

49.2

0.02

2.3

74.35

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580