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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27720976_27721250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27720976 - 27721250

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTACCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACCT

Flanking Amino Acid:

IKTTAKLNVEGAVVEFIKEL

Intron Amino Acid Position:

2041

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

83.6

0.76

0.7

79.1

28.5

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

67.4

0.62

1.6

82.67

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580