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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27723844_27723946_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27723844 - 27723946

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTATT

5'SS Class:

weak_major

3'SS Sequence:

TTTGCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

CTTGTGGTAACC

Flanking Amino Acid:

ASVSMTLTVEAKEDLVRPHF

Intron Amino Acid Position:

1327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

83.5

35.1

Major BPS

70.2

0.5

72.1

Major PPT

87.6

0.84

0.7

85.1

29.7

Minor 5ss

61.6

0.39

2.1

77.4

37.4

Minor BPS

43.6

-0.5

2.6

60.68

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580