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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27726193_27726333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27726193 - 27726333

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CTTTTCTGTACA

Flanking Amino Acid:

VVVRTFVEDEEFHISSFEER

Intron Amino Acid Position:

1039

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

84.2

0.77

0.8

79.7

32.4

Minor 5ss

43.9

-0.7

2.8

58.4

46.1

Minor BPS

57.4

0.23

1.8

71.49

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580