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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27729636_27729981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27729636 - 27729981

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TATATCATATTT

Flanking Amino Acid:

VSTSCHLHVKVSEETEARET

Intron Amino Acid Position:

831

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

81.2

0.7

0.9

74.2

35.9

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

48.8

-0

1.9

70.59

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045042

27647096 - 27747675

100580

ENSAPLT00000048321

27647096 - 27747675

100580