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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27736317_27738272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27736317 - 27738272

Intron Length:

1956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTAAACATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAATTTTGAATT

Flanking Amino Acid:

AGEVATGAKEVRKEPEKTPV

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.5

34.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

63.5

0.3

1.1

52.5

Minor 5ss

38.7

-1.3

3.4

56.7

47.6

Minor BPS

62.2

0.46

1.3

74.42

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045042

27647096 - 27747675

100580