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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27742143_27745178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27742143 - 27745178

Intron Length:

3036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

AGAATCTTAATC

Flanking Amino Acid:

SAATFEAHISGFPVPEVSWY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

81.3

33.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.6

0.64

0.8

77.5

30.9

Minor 5ss

42.8

-0.8

3.4

61.3

44.6

Minor BPS

62.1

0.36

1.3

63.07

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022613

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048321

27647096 - 27747675

100580

ENSAPLT00000045042

27647096 - 27747675

100580