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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27765827_27767678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27765827 - 27767678

Intron Length:

1852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTAGC

5'SS Class:

major

3'SS Sequence:

CTCTCTGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

CTGACGTGAAAA

Flanking Amino Acid:

VTGFPEPTLTWYKKGQKVTA

Intron Amino Acid Position:

1290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

64.9

41.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

79.2

0.66

0.8

76.5

32.2

Minor 5ss

29.4

-2.4

2.9

36.9

Minor BPS

43.6

-0.4

2.2

54.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026750

27765553 - 27832034

66482