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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27767875_27768410_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27767875 - 27768410

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTATATCAC

5'SS Class:

weak_major

3'SS Sequence:

ATGTTTCAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CATGTTTCAATC

Flanking Amino Acid:

EEIPSGDEYEYATRSCQRQM

Intron Amino Acid Position:

1225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.2

51.2

39.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

68.9

0.43

68.3

41.9

Minor 5ss

41.9

-0.9

2.9

52.9

44.5

Minor BPS

48.2

-0.1

1.6

54.44

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026750

27765553 - 27832034

66482