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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27772202_27772862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27772202 - 27772862

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCG

5'SS Class:

major

3'SS Sequence:

ATTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATCAGAAAA

Flanking Amino Acid:

IDEAEEKKQQTGSDILLTTS

Intron Amino Acid Position:

1149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

1.3

72.3

40.1

Major BPS

100

1.24

0.5

100

Major PPT

85.4

0.8

82.7

32.9

Minor 5ss

35.9

-1.6

2.6

42.2

44.4

Minor BPS

45.9

-0.3

1.8

59.16

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026750

27765553 - 27832034

66482