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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27803333_27809115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27803333 - 27809115

Intron Length:

5783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAA

U12 Branch Point Sequence:

TTTTTCCTATCA

Flanking Amino Acid:

EHKEMEVKVKEWNSTVEQLE

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

64.3

0.36

71.3

30.3

Major PPT

86.4

0.82

0.8

86.6

26.1

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

61.6

0.36

1.9

79.7

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026750

27765553 - 27832034

66482