Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_27809236_27815352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27809236 - 27815352

Intron Length:

6117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTGACT

Flanking Amino Acid:

IFLWHQQENKVTSWYKKNIR

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

100

1.24

0.5

100

Major PPT

75.2

0.57

0.9

70.9

39.3

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

80.4

1.04

1.5

96.95

27.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026750

27765553 - 27832034

66482