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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27856689_27860099_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
27856689 - 27860099

Intron Length:
3411

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTGAGAATT

5'SS Class:
major

3'SS Sequence:
TTTGTGTCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ATTATTTTAATA

Flanking Amino Acid:
KHEEIESQHSEWFAVYVELN

Intron Amino Acid Position:
324

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.1
0.45
1.1
73.6
36.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
78.9
0.65
0.9
73.9
36.8

Minor 5ss
36
-1.6
3.2
50.4
45.6

Minor BPS
69.1
0.59
1.2
73.73
31.7

Associated Gene:

Gene:
SESTD1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

27844544 - 27885803
41260