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Intron Name: Anas_platyrhynchos_platyrhynchos_7_278617_279294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

278617 - 279294

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGTG

5'SS Class:

major

3'SS Sequence:

TTTGTTAATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTTTTGTTAATT

Flanking Amino Acid:

LASVAAVAANKTNRAVRLIL

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

69.9

41.1

Major BPS

84.4

0.85

34.5

Major PPT

76.4

0.59

0.9

75.5

38.6

Minor 5ss

36.6

-1.5

3.6

48.4

42.2

Minor BPS

0.52

2.1

82.74

39.5

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157

ENSAPLT00000025359

264624 - 306968

42345