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Intron Name: Anas_platyrhynchos_platyrhynchos_7_27924056_27929291_R

Intron Information:

Intron Rank:

152217

Intron Class:

major

Intron Phase:

Intron Coordinates:

27924056 - 27929291

Intron Length:

5236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TAGCATTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

49.4

0.04

1.8

67.47

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041378

27922145 - 27931118

8974