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Intron Name: Anas_platyrhynchos_platyrhynchos_7_280584_281465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

280584 - 281465

Intron Length:

882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCATTGGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTCTGGTAACA

Flanking Amino Acid:

AFETVDGILEGEVHIGGQEH

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

62.6

0.28

1.1

61.8

43.3

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

47.9

-0.1

2.6

72.02

40.3

Associated Gene:

Gene:

AOX1

Ensembl Gene ID:

ENSAPLG00000008708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025359

264624 - 306968

42345

ENSAPLT00000022758

264624 - 306968

42345

ENSAPLT00000018331

263911 - 307009

43099

ENSAPLT00000009339

268146 - 306968

38823

ENSAPLT00000045156

267812 - 306968

39157