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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28162414_28175422_R

Intron Information:

Intron Rank:

137546

Intron Class:

major

Intron Phase:

Intron Coordinates:

28162414 - 28175422

Intron Length:

13009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGCT

U12 Branch Point Sequence:

TTTTGCTCTGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.8

35.2

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

76.1

0.59

0.8

69.4

31.3

Minor 5ss

29.8

-2.3

2.6

30.2

36.8

Minor BPS

38.2

-0.8

3.8

76.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046292

28160587 - 28176130

15544

ENSAPLT00000030430

28161504 - 28176130

14627

ENSAPLT00000021974

28160921 - 28175756

14836