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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28184707_28184881_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28184707 - 28184881

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

GCTCCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAC

U12 Branch Point Sequence:

GCTGGCTGAGCC

Flanking Amino Acid:

TRRLPYGPFTEEGERWYRLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

65.1

40.7

Major BPS

1.5

63.1

44.5

Major PPT

76.5

0.6

0.8

69.2

31.3

Minor 5ss

32.7

-2

2.9

39.3

39.7

Minor BPS

42.8

-0.5

2.1

51.68

45.2

Associated Gene:

Gene:

CYP27A1

Ensembl Gene ID:

ENSAPLG00000004381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028454

28184516 - 28187321

2806

ENSAPLT00000004522

28184516 - 28187628

3113