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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28185082_28185159_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28185082 - 28185159

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGGG

5'SS Class:

major

3'SS Sequence:

TCTGTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

GGGGTCTGGATG

Flanking Amino Acid:

ANLLYRFALEGISYILFETR

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.2

41.7

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

78.5

0.64

0.8

73.3

31.7

Minor 5ss

29.2

-2.4

3.4

38.5

46.6

Minor BPS

43.4

-0.6

1.5

39.53

38.4

Associated Gene:

Gene:

CYP27A1

Ensembl Gene ID:

ENSAPLG00000004381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028454

28184516 - 28187321

2806

ENSAPLT00000004522

28184516 - 28187628

3113