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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28186337_28186407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28186337 - 28186407

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTCAG

5'SS Class:

major

3'SS Sequence:

TCTCACCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCCTTCTCACCC

Flanking Amino Acid:

IIGDYLFPKNTLFVLAHYAM

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

64.9

42.8

Major BPS

0.87

0.8

85.6

Major PPT

72.6

0.51

0.8

65.9

29.7

Minor 5ss

29.5

-2.3

2.8

31.4

35.4

Minor BPS

-0.2

1.8

53.1

45.1

Associated Gene:

Gene:

CYP27A1

Ensembl Gene ID:

ENSAPLG00000004381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028454

28184516 - 28187321

2806

ENSAPLT00000004522

28184516 - 28187628

3113