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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28189125_28189227_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
28189125 - 28189227

Intron Length:
103

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTACGCGGG

5'SS Class:
major

3'SS Sequence:
TGTCTCCTCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAG

U12 Branch Point Sequence:
CCCTCCTGAGCC

Flanking Amino Acid:
VSALPVINAAGQVVGLYSRF

Intron Amino Acid Position:
274

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.2
49.5
47.2

Major BPS
54.8
0.12
1.6
53.3
44.2

Major PPT
78.9
0.65
0.8
73.3
31.6

Minor 5ss
35.1
-1.7
3.5
46.5
48.8

Minor BPS
51
0.01
1.8
58.78
46.1

Associated Gene:

Gene:
PRKAG3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28188483 - 28191493
3011

28188483 - 28191043
2561