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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28190655_28190735_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
28190655 - 28190735

Intron Length:
81

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGTGTT

5'SS Class:
strong_major

3'SS Sequence:
AGAGCCGGGGCAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CTCAGAG

U12 Branch Point Sequence:
GGCACCGGGACC

Flanking Amino Acid:
LDAAAHPKDEGLPVGFPEVP

Intron Amino Acid Position:
14

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.2
0.81
0.9
81.3
32.8

Major BPS
45.2
-0.3
1.5
44.1
39.6

Major PPT
47
-0.1
1.1
35.5
40.6

Minor 5ss
31.8
-2.1
3.6
48.2
47.9

Minor BPS
42.1
-0.6
2.1
48.93
40.9

Associated Gene:

Gene:
PRKAG3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28188483 - 28191043
2561

28188483 - 28191493
3011