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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28190776_28191460_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
28190776 - 28191460

Intron Length:
685

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCCCCG

5'SS Class:
major

3'SS Sequence:
CGTGCCCCCTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
TGCTGCTGACCC

Flanking Amino Acid:
EQLPGPAAPQMALLDAAAHP

Intron Amino Acid Position:
12

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.8
0.3
1.3
48.3
47.8

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
67
0.38
0.9
62.2
34.7

Minor 5ss
42.7
-0.8
3.1
57.6
46.6

Minor BPS
46.5
-0.2
2.1
59.68
45.2

Associated Gene:

Gene:
PRKAG3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28188483 - 28191493
3011