Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_28229445_28229624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28229445 - 28229624

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

GGTTCCTAAAAG

Flanking Amino Acid:

IDNPKWYSERGIPYRRGYLL

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.9

82.1

33.8

Major BPS

72.7

0.57

72.1

31.1

Major PPT

73.4

0.53

0.8

35.9

Minor 5ss

26.2

-2.7

41.7

Minor BPS

56.6

0.07

1.9

62.54

44.6

Associated Gene:

Gene:

BCS1L

Ensembl Gene ID:

ENSAPLG00000005237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005408

28228041 - 28230443

2403