Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_28233131_28233297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28233131 - 28233297

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGGC

5'SS Class:

major

3'SS Sequence:

GTCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAG

U12 Branch Point Sequence:

TGCCGCGGCACC

Flanking Amino Acid:

VLIRHMLLHTGEKPHKCELC

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

58.7

40.2

Major BPS

41.4

-0.5

1.5

47.8

37.7

Major PPT

68.8

0.42

0.8

61.8

28.9

Minor 5ss

25.8

-2.8

3.2

25.2

37.3

Minor BPS

34.4

-1.2

2.5

45.01

43.1

Associated Gene:

Gene:

ZNF142

Ensembl Gene ID:

ENSAPLG00000026417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037803

28231822 - 28239565

7744