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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28233476_28233947_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28233476 - 28233947

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACTGCCC

5'SS Class:

weak_major

3'SS Sequence:

GCTCTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TCCTCCTGACCG

Flanking Amino Acid:

VHMRKHTGDLRYQCNQCSYR

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.2

45.7

42.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

72.1

0.5

0.8

64.9

30.8

Minor 5ss

31.5

-2.1

3.4

43.5

43.8

Minor BPS

53.4

-0

1.9

59.75

47.8

Associated Gene:

Gene:

ZNF142

Ensembl Gene ID:

ENSAPLG00000026417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037803

28231822 - 28239565

7744