Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_28237162_28237754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28237162 - 28237754

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTGCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTCCCCCTGACC

Flanking Amino Acid:

YACADPSRLKYHMRIHKEER

Intron Amino Acid Position:

1484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

71.3

0.48

0.9

64.2

36.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

0.11

1.7

64.2

41.5

Associated Gene:

Gene:

ZNF142

Ensembl Gene ID:

ENSAPLG00000026417

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037803

28231822 - 28239565

7744