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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28237791_28239547_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28237791 - 28239547

Intron Length:

1757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCTGGGG

5'SS Class:

weak_major

3'SS Sequence:

AGTCCGGGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTCAC

U12 Branch Point Sequence:

ATTCACCCACTT

Flanking Amino Acid:

PGERSLPGAVGYLRSSLWIR

Intron Amino Acid Position:

591

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.1

38.7

41.2

Major BPS

64.5

0.36

1.2

69.3

37.7

Major PPT

42.8

-0.4

1.7

37.6

39.2

Minor 5ss

21.7

-3.3

3.3

20.2

37.7

Minor BPS

-0.6

2.1

62.28

41.4

Associated Gene:

Gene:

PLCD4

Ensembl Gene ID:

ENSAPLG00000025810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029743

28237631 - 28244819

7189