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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28241216_28241345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28241216 - 28241345

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGGGGC

5'SS Class:

major

3'SS Sequence:

TCCACCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAC

U12 Branch Point Sequence:

AGCACCCCAAGG

Flanking Amino Acid:

RVPTQLPSPEELKHKILLKG

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.2

64.8

41.3

Major BPS

49.8

-0

1.4

64.2

Major PPT

0.52

0.8

65.7

30.1

Minor 5ss

25.9

-2.8

3.2

33.2

Minor BPS

39.5

-0.9

40.57

42.9

Associated Gene:

Gene:

PLCD4

Ensembl Gene ID:

ENSAPLG00000025810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029743

28237631 - 28244819

7189