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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28241758_28242007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28241758 - 28242007

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

TGCCCACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GATTGCCCACCC

Flanking Amino Acid:

RGQSSIEGYIRALKRGCRCL

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

65.9

0.36

0.9

58.5

31.8

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

40.2

-0.7

2.3

53.56

43.5

Associated Gene:

Gene:

PLCD4

Ensembl Gene ID:

ENSAPLG00000025810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029743

28237631 - 28244819

7189