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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28252820_28254086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28252820 - 28254086

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GACGCTTTAACT

Flanking Amino Acid:

ERFSHVAMILGKMVLQLSKE

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

79.6

29.4

Major BPS

77.3

0.68

79.3

29.4

Major PPT

66.7

0.38

62.1

37.8

Minor 5ss

41.7

-0.9

3.1

53.2

Minor BPS

66.3

0.59

1.4

73.5

43.4

Associated Gene:

Gene:

CNOT9

Ensembl Gene ID:

ENSAPLG00000005817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020698

28251670 - 28259169

7500

ENSAPLT00000006038

28252432 - 28259169

6738