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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28254186_28254866_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28254186 - 28254866

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATCTACA

5'SS Class:

weak_major

3'SS Sequence:

CTCCCTGTTCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CTCTCTTTGATT

Flanking Amino Acid:

MESGSELSKTVATFILQKIL

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.2

64.6

41.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

54.7

0.11

1.7

60.3

40.3

Minor 5ss

48.1

-0.2

2.2

61.2

43.3

Minor BPS

69.9

0.71

1.2

78.04

39.4

Associated Gene:

Gene:

CNOT9

Ensembl Gene ID:

ENSAPLG00000005817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020698

28251670 - 28259169

7500

ENSAPLT00000006038

28252432 - 28259169

6738