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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28255503_28256538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28255503 - 28256538

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTGTCTCTCACG

Flanking Amino Acid:

LQCVASHPETRSAFLAAHIP

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

72.7

0.56

30.1

Major PPT

81.6

0.71

0.7

75.6

26.7

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

49.5

-0.1

2.1

63.53

44.6

Associated Gene:

Gene:

CNOT9

Ensembl Gene ID:

ENSAPLG00000005817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020698

28251670 - 28259169

7500

ENSAPLT00000006038

28252432 - 28259169

6738