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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28256655_28257438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28256655 - 28257438

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTAATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCTCCCTTAACT

Flanking Amino Acid:

SFGTIAALLQEIVNIYPSIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

77.6

0.62

0.9

74.6

Minor 5ss

28.3

-2.5

2.8

32.9

42.1

Minor BPS

86.1

1.21

93.68

34.1

Associated Gene:

Gene:

CNOT9

Ensembl Gene ID:

ENSAPLG00000005817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020698

28251670 - 28259169

7500

ENSAPLT00000006038

28252432 - 28259169

6738