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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28257619_28259145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28257619 - 28259145

Intron Length:

1527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

GTCTCCTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

ATAGTCATAACG

Flanking Amino Acid:

MHSLATAAPVPTALAQVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

63.4

35.3

Major BPS

0.67

1.1

77.7

37.1

Major PPT

77.2

0.61

0.8

68.8

37.1

Minor 5ss

26.7

-2.7

3.2

34.9

41.1

Minor BPS

51.7

-0

1.8

59.27

42.3

Associated Gene:

Gene:

CNOT9

Ensembl Gene ID:

ENSAPLG00000005817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006038

28252432 - 28259169

6738

ENSAPLT00000020698

28251670 - 28259169

7500