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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28281090_28283359_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28281090 - 28283359

Intron Length:

2270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGGGTGTT

5'SS Class:

weak_major

3'SS Sequence:

TGTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

GGGGGATTAATT

Flanking Amino Acid:

QPSQGTPGVTAATPCAPAVN

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.3

63.5

42.9

Major BPS

0.6

1.2

75.9

36.3

Major PPT

83.8

0.76

0.8

77.6

31.1

Minor 5ss

33.6

-1.9

3.7

52.6

44.9

Minor BPS

44.9

-0.3

2.1

58.33

44.7

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000039903

28280748 - 28314913

34166