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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28283399_28286310_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28283399 - 28286310

Intron Length:

2912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

ACGGCAGTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

54.4

0.11

1.2

36.4

Major PPT

76.1

0.59

0.9

73.6

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

45.3

-0.2

2.3

62.94

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554