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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28287003_28287143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28287003 - 28287143

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCGT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CATTCCTCACCC

Flanking Amino Acid:

RHDISKLHPKVLDFGWPDLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

68.8

43.8

Major BPS

72.4

0.56

73.5

32.5

Major PPT

71.1

0.47

0.9

62.9

38.1

Minor 5ss

29.1

-2.4

3.2

40.9

45.4

Minor BPS

56.6

0.19

1.9

67.81

43.6

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000042608

28286311 - 28314913

28603