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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28287939_28288231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28287939 - 28288231

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACGGTGC

5'SS Class:

major

3'SS Sequence:

TGATGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAA

U12 Branch Point Sequence:

CCCCGCTGATGT

Flanking Amino Acid:

HGIPNFESKGGCRPFLKIYQ

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

56.3

43.8

Major BPS

49.8

-0

1.1

36.1

Major PPT

75.7

0.58

45.1

Minor 5ss

36.5

-1.5

3.5

49.8

46.8

Minor BPS

36.3

-0.9

2.1

45.24

45.9

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000042608

28286311 - 28314913

28603

ENSAPLT00000039903

28280748 - 28314913

34166