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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28288293_28289184_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28288293 - 28289184

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAATTATC

5'SS Class:

major

3'SS Sequence:

TCCCTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAC

U12 Branch Point Sequence:

TGTGCTGCCACC

Flanking Amino Acid:

AMQPVYTSGIYNVQGDSQTG

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

73.6

35.2

Major BPS

52.2

0.06

1.4

64.2

Major PPT

77.3

0.61

0.7

72.3

25.8

Minor 5ss

42.2

-0.9

2.8

56.6

35.5

Minor BPS

39.7

-0.8

2.4

54.58

43.9

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000042608

28286311 - 28314913

28603

ENSAPLT00000039903

28280748 - 28314913

34166