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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28289261_28289348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28289261 - 28289348

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCCTCCTCATCC

Flanking Amino Acid:

PGLLLKGDILLKCYHKKFRS

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

75.7

0.58

0.8

69.7

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

55.9

0.16

1.9

66.27

45.4

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000042608

28286311 - 28314913

28603

ENSAPLT00000039903

28280748 - 28314913

34166