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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28289801_28290111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28289801 - 28290111

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCTC

5'SS Class:

major

3'SS Sequence:

CTCTTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

TCTTCCTCCCAG

Flanking Amino Acid:

VFSYGPEKIQGMEHLENGPS

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

43.2

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

80.5

0.69

0.7

72.7

32.1

Minor 5ss

34.2

-1.8

3.6

50.1

46.4

Minor BPS

35.1

-1.2

3.6

52.48

47.8

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000042608

28286311 - 28314913

28603

ENSAPLT00000039903

28280748 - 28314913

34166