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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28303559_28305438_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28303559 - 28305438

Intron Length:

1880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGATTT

5'SS Class:

strong_major

3'SS Sequence:

CCGGTGCCGACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

CCCCCTATAATG

Flanking Amino Acid:

ASPSSPTSGGVRSPPGLAKT

Intron Amino Acid Position:

1176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

32.5

Major BPS

75.5

0.63

1.1

34.4

Major PPT

55.9

0.13

1.1

49.2

39.5

Minor 5ss

38.9

-1.2

3.3

57.2

46.9

Minor BPS

46.4

-0.4

1.7

44.75

42.2

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000042608

28286311 - 28314913

28603

ENSAPLT00000039903

28280748 - 28314913

34166