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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28305532_28306150_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28305532 - 28306150

Intron Length:

619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCGAGCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

CTCTCTTCCATC

Flanking Amino Acid:

PAEILLHPVGEGEAGAASAE

Intron Amino Acid Position:

1207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

0.37

1.3

76.1

Major PPT

56.4

0.15

50.6

38.4

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

47.1

-0.2

1.9

57.42

42.5

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000042608

28286311 - 28314913

28603