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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28306181_28308426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28306181 - 28308426

Intron Length:

2246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATCAT

U12 Branch Point Sequence:

CGTTGCAGATCA

Flanking Amino Acid:

EGEAGAASAEEPRSYVESVA

Intron Amino Acid Position:

1217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

64.2

0.35

1.2

65.8

Major PPT

77.4

0.62

0.7

72.3

25.8

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

40.8

-0.7

2.2

53.94

44.1

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000042608

28286311 - 28314913

28603