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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28311161_28311531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28311161 - 28311531

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTGC

5'SS Class:

major

3'SS Sequence:

CATCCCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

TGTGGTGTGACG

Flanking Amino Acid:

PPTVMQQNKKGDITNELVRH

Intron Amino Acid Position:

1385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

59.4

40.4

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

74.1

0.54

0.8

35.9

Minor 5ss

43.2

-0.7

3.1

59.3

45.4

Minor BPS

41.1

-0.8

2.4

50.31

44.5

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000042608

28286311 - 28314913

28603

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000030362

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166