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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28312874_28313141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28312874 - 28313141

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CTTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

CGTCCCTCACAC

Flanking Amino Acid:

TFCDLDPQERKWTKTDGSGP

Intron Amino Acid Position:

1545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.1

34.2

Major BPS

55.5

0.14

64.3

32.4

Major PPT

86.3

0.82

0.7

80.7

24.4

Minor 5ss

34.3

-1.8

3.4

44.2

37.7

Minor BPS

45.4

-0.3

1.9

54.41

42.9

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000030362

28280748 - 28314913

34166