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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28312874_28313768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28312874 - 28313768

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

TTTCCCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGGCAA

U12 Branch Point Sequence:

GCTGGCAAACCT

Flanking Amino Acid:

TFCDLDPQERKLFGFVARKQ

Intron Amino Acid Position:

1669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.1

34.2

Major BPS

45.4

-0.2

1.4

52.7

43.2

Major PPT

81.5

0.71

0.7

73.4

31.5

Minor 5ss

34.3

-1.8

3.4

44.2

37.7

Minor BPS

36.2

-0.9

2.3

52.67

48.1

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042608

28286311 - 28314913

28603