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Intron Name: Anas_platyrhynchos_platyrhynchos_7_28313175_28313768_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28313175 - 28313768

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGGCAA

U12 Branch Point Sequence:

GCTGGCAAACCT

Flanking Amino Acid:

WTKTDGSGPAKLFGFVARKQ

Intron Amino Acid Position:

1556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

45.4

-0.2

1.4

52.7

43.2

Major PPT

81.5

0.71

0.7

73.4

31.5

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

36.2

-0.9

2.3

52.67

48.1

Associated Gene:

Gene:

TNS1

Ensembl Gene ID:

ENSAPLG00000025012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024108

28280748 - 28314913

34166

ENSAPLT00000045619

28280748 - 28314913

34166

ENSAPLT00000018274

28283360 - 28314913

31554

ENSAPLT00000043156

28280748 - 28314913

34166

ENSAPLT00000039903

28280748 - 28314913

34166

ENSAPLT00000030362

28280748 - 28314913

34166